Table 1

High throughput read sets analyzed in this study
Species N Read type Accession (reads) MLST database Reference genome
Staphylococcus aureus[4] 67 37 bp SE ERP000070 http://saureus.mlst.net/ webcite NC_002952.2
Salmonella bongori[17] 18 54 bp PE ERP000328 http://mlst.ucc.ie/mlst/ webcite NC_011900.1
Streptococcus pneumoniae[6] 256 54 bp PE ERP000139 http://spneumoniae.mlst.net/ webcite NC_011149.1
Shigella sonnei[19] 188 54 bp PE ERP000182 http://mlst.ucc.ie/mlst/ webcite NC_000913.2

PE = paired end sequencing, SE = single end sequencing.

Inouye et al.

Inouye et al. BMC Genomics 2012 13:338   doi:10.1186/1471-2164-13-338

Open Data