Table 1

General features of seven completely sequenced Streptomyces chromosomes *
Species Length (bp) TIR (bp) GC Content (%) CDS (no.) Average CDS size (bp) Coding (%) rRNA Operons (no.) tRNA (no.)
S. hygroscopicus 5008 10,145,833 14 71.9 8,849 952 83.2 6 68
S. coelicolor A3(2) 8,667,507 21,653 72.1 7,825 991 88.9 6 63
S. avermitilis MA-4680 9,025,608 49 70.7 7,582 1,027 86.3 6 68
S. griseus IFO13350 8,545,929 132,910 72.2 7,138 1,055 88.1 6 66
S. scabies 87.22 10,148,695 18,488 71.5 8,746 1,005 86.2 6 75
S. bingchenggensis BCW-1 11,936,683 400,000 70.8 10,023 1,031 86.6 6 ND
S. clavuligerus ATCC 27064 6,760,392 ND 72.0 5,710 1,031 87.1 6 66

* Data were obtained from GenBank: S. coelicolor A3(2), NC_003888; S. avermitilis MA-4680, NC_003155; S. griseus IFO13350, NC_010572; S. scabies 87.22, NC_013929; S. bingchenggensis BCW-1, CP002047; S. clavuligerus ATCC 27064, CM000913. ND, not determined.

Wu et al.

Wu et al. BMC Genomics 2012 13:337   doi:10.1186/1471-2164-13-337

Open Data