Table 1

Summary of Canine Centromeric Sequence Database
Content of Satellite DNA Sequence Database (Mb) [Phase i] Satellite DNA Unique k-mers (x 106)
Centromeric Satellite Family Total satellite DNA contained in reads (7.5x coverage) Total satellite DNA contained in reads (~1x coverage) Other DNA contained in reads Total Unique [Phase II] Unique CENP-A-associated [Phase III]
CarSat1 327.5 43.6 2.8 5.1 1.5
Sat1CF 212.5 28.3 1.4 12.9 0.9
Sat2CF 15.4 2.1 1.8 0.7 0.05
Sat3CF 14.7 2.0 0.2 1.4 0.2
CarSat2 5.9 0.8 0.3 0.3 0.05
Sat4CF 1.5 0.2 0.1 0.1 0.02
Sat6CF 1.4 0.2 0.1 0.2 0.05

Hayden and Willard

Hayden and Willard BMC Genomics 2012 13:324   doi:10.1186/1471-2164-13-324

Open Data