Table 1 |
|||||
| Transcriptome statistics | |||||
| Contig length | Number | Percentage (%) | Uni-scaffold length | Number | Percentage (%) |
| 100 ~ 200 bp | 205,735 | 60.02 | 100 ~ 200 bp | 4,613 | 10.84 |
| 201 ~ 300 bp | 70,767 | 20.65 | 201 ~ 300 bp | 5,727 | 13.45 |
| 301 ~ 400 bp | 26,685 | 7.79 | 301 ~ 400 bp | 3,786 | 8.89 |
| 401 ~ 500 bp | 14,143 | 4.13 | 401 ~ 500 bp | 2,709 | 6.36 |
| 501 ~ 600 bp | 8,174 | 2.38 | 501 ~ 600 bp | 2,053 | 4.82 |
| 601 ~ 700 bp | 5,052 | 1.47 | 601 ~ 700 bp | 1,756 | 4.13 |
| 701 ~ 800 bp | 3,336 | 0.97 | 701 ~ 800 bp | 1,534 | 3.60 |
| 801 ~ 900 bp | 2,332 | 0.68 | 801 ~ 900 bp | 1,415 | 3.32 |
| 901 ~ 1000 bp | 1,514 | 0.44 | 901 ~ 1000 bp | 1,343 | 3.16 |
| 1001 ~ 2000 bp | 4,567 | 1.33 | 1001 ~ 2000 bp | 10,256 | 24.09 |
| 2001 ~ 3000 bp | 422 | 0.12 | 2001 ~ 3000 bp | 4,616 | 10.84 |
| 3001 ~ 10 kbp | 49 | 0.01 | 3001 ~ 10 kbp | 2,734 | 6.42 |
| >10 kbp | 0 | 0.00 | >10 kbp | 24 | 0.06 |
| Total Contigs | 342,776 | 100.00 | Total Uni-scaffolds | 42,566 | 100.00 |
| Total Length (bp) | 82,262,551 | Total Length (bp) | 47,986,977 | ||
| N50 Length (bp) | 263 | N50 Length (bp) | 1,901 | ||
| Mean Length (bp) | 239 | Mean Length (bp) | 1,127 | ||
Zhang et al. BMC Genomics 2012 13:316 doi:10.1186/1471-2164-13-316
