Additonal file 1 .
Figure S1. Alignments of the conserved domains of VdLs.17 Tc1/mariner-like DAHLIAE transposases. The amino acid alignments of the conserved domains DDE_1 (A), HTH_psq (B) and HTH_Tnp_Tc5 (C), which characterize the transposases of the Tc1/mariner element DAHLIAE are shown. The alignments were generated using CLUSTALW and the amino acid conservation visualized using Jalview tools. The red boxes indicate the positions of the aspartic acid triad that characterize the endonuclease DDE_1 motif. The alignments include sequences from other fungi that are the best matches of the DAHLIAE transposases (listed in Table 1).
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Amyotte et al. BMC Genomics 2012 13:314 doi:10.1186/1471-2164-13-314