Figure 5.

Schematic diagrams of the structure prediction for the rice OsGELP esterase/lipase proteins.A. The stereoview of the ribbon diagram for general structure prediction model of the OsGELP proteins is given. The six-stranded β-sheet is labelled. The catalytic triad Ser, Asp, and His are shown as sticks. B. Common schematic view of the OsGELP protein secondary structure. The folds showing six parallel β-strands are labelled β1–β6 and helices are labelled α1–α6. The loop regions are labelled L1–L10. The location of the GDSL consensus blocks is coloured magenta and catalytic residues are shown. Highly variable motif composition loops (L1, L3, and L9) are pointed out. The phylogenetic subclade in Figure 4, which contains specific motif(s) within the mentioned loops, is enclosed in shaded coloured boxes next to the motif’ numbers.

Chepyshko et al. BMC Genomics 2012 13:309   doi:10.1186/1471-2164-13-309
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