Main Contig/Unigene annotation page. From the contig page described in Figure 6A, there is a link to the detailed annotation page (A). There are several annotations available such as interproscan, TMHMM, SignalP etc. We used an in-house program to predict UTRs in unigenes. The highlighted areas in (A) are the UTRs. Further down on the page, there are Fickett statistics and a log-likelihood plot for that sequence confirming presence of UTRs. (B) Shows the annotation page for an EST singleton. The highlighted area contains the EST trimming information and below the sequence there is a base quality plot. (C) Shows on-the-fly blat result of the EST against the genome.
Tripathy et al. BMC Genomics 2012 13:303 doi:10.1186/1471-2164-13-303