Table 3 |
|||
| Phylogenetically polarized lineage-specific substitutions for a)Gossypium barbadense, and b)Gossypium hirsutumallotetraploid genomes relative to their A- and D-genome diploid counterparts | |||
| Lineage | Number of Contigs | Total Nucleotides | Lineage-Specific Substitutions |
| a) Gossypium barbadense lineage-specific SNPs relative to A- and D-genome diploids | |||
| A2 | 4,863 | 3,755,712 | 3,211 |
| AT | 4,863 | 3,755,712 | 5,556 |
| D5 | 5,750 | 3,735,542 | 4,754 |
| DT | 5,750 | 3,735,542 | 8,653 |
| b) Gossypium hirsutum lineage-specific SNPs relative to A- and D-genome diploids | |||
| Lineage | Number of Contigs | Total Nucleotides | Lineage-Specific Substitutions |
| A2 | 5,051 | 3,839,389 | 3,977 |
| AT | 5,051 | 3,839,389 | 6,412 |
| D5 | 6,041 | 4,079,248 | 6,138 |
| DT | 6,041 | 4,079,248 | 10,393 |
Flagel et al. BMC Genomics 2012 13:302 doi:10.1186/1471-2164-13-302
