Table 2

Statistics of the de novo transcriptome assembly
Number Total base (bp) Average length (bp) Median (bp)
Contigs 4,883 6,642,939 1360.4 1,252
Singletons 8,284 5,919,589 701.1 672
Unique sequences 13,167 12,562,528 940.5 846

Summary of the de novo transcriptome assembly using filter-passed and vector trimmed reads, pre-assembly contigs, and full-insert sequences.

Nishimura et al.

Nishimura et al. BMC Genomics 2012 13:289   doi:10.1186/1471-2164-13-289

Open Data