Table 4 |
|||||
| The DQ2- γ-II epitope in transcripts ofT.aestivum | |||||
| 1 2 3 4 5 6 7 8 9 | locus | group | % | ||
| LVQGQGI | IQPQQPAQL | EVIRSLVLGTLPTMCN | Gli-A1 | 6 | 19 |
| LVQGQGI | IQPQQPAQY | EVIRSLVLRTLPNMCN | Gli-A1 | 7 | 5 |
| LVQGQGI | IQPQQPAQL | EVIRSLVLRTLPTMCN | Gli-B1 | 3 | 6 |
| LVQGQGI | IQPQQLAQL | EAIRSLVLQTLPTMCN | Gli-B1 | 8 | 3 |
| LAQGLGI | IQPQQPAQL | EGIRSLVLKTLPTMCN | Gli-B1 | 5 | 17 |
| LVQGQGI | IQPQQPAQL | EAIRSLVLQTLPSMCN | Gli-D1 | 9 | 41 |
| LVQGQGI | IQPQQPAQL | EAIRSLVLQTLPTMCN | Gli-D1 | 10 | 9 |
Natural variants of γ-II (glia-γ30; IQPQQPAQ) epitope in expressed γ-gliadins of T.aestivum. This epitope is located in the C-terminal part of γ-gliadins (domain V). % = fraction of total number of γ-gliadins transcripts. Glutamine residues that are a primary targets for the enzyme tissue transglutaminase are to depicted in bold (Q) in QxP target sites whereas moderate target sites are depicted in italics, (Q) [13,14]. Cleavage sites: R, K in bold, trypsin; cleavage occurs at the right side (C-terminal direction) of the marked amino acid.
Salentijn et al. BMC Genomics 2012 13:277 doi:10.1186/1471-2164-13-277
