Table 3

Length dependence of BLAST alignment success
Contig size range Total number of contigs in size range Number of contigs in size range with BLAST alignments (e-value ≤ 1e-10) % of contigs in size range with BLAST alignments (e-value ≤ 1e-10)
200 bp – 599 bp 35,424 11,356 32%
600 bp – 999 bp 9,372 6,080 65%
1000 bp – 1399 bp 5,239 4,113 79%
≥ 1400 bp 7,983 7,244 91%

Lehnert et al.

Lehnert et al. BMC Genomics 2012 13:271   doi:10.1186/1471-2164-13-271

Open Data