Additional file 7.
Depth of MeDIP-seq genome coverage. Bars represent the portion of the P. trichocarpa V2.2 genome covered by MeDIP sequence data, organized by tissue type. "Input" is constituted of three sequencing lanes of a non-immunoprecipitated control sample. Darker bars indicate genome coverage by uniquely-mapping reads, while lighter upper parts of bars show genome coverage by reads that mapped to more than one position and were equally distributed over all genome occurrences. Uniquely-mapping reads and distributed k-mer repeats are not mutually exclusive, in that reads of the two different types may partially overlap. A. Overall genome coverage by MeDIP-seq reads. B. Average per-nucleotide sequence depth.
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Vining et al. BMC Genomics 2012 13:27 doi:10.1186/1471-2164-13-27