Table 1

Isolates used in this study
Identifier Alternate identifier Origin Source Year isolated Reference
M. ulceransisolates
Mu_06-3845 ITM001441 Houedja, Ouinhi, Zou, Benin Aquatic insect 2000 [28]
Mu_06-3846 ITM971116 Lalo, Couffo, Benin Human 1997 This study
Mu_07-1082 ITM030216 Adjohoun, Ouémé, Benin Human 2003 This study
Mu_1G897 Cayenne, French Guiana Human 1988 [29]
Mu_Agy99 Ga District, Ghana Human 1999 [1]
Mu_NM14.01 Ga District, Ghana Human 2001 [30]
Mu_NM33.04 Amansie West District, Ghana Human 2004 [30]
Mu_NM43.02 Ga District, Ghana Human 2002 [30]
Mu_NM49.02 Ga District, Ghana Human 2002 [30]
Mu_NM54.02 Ga District, Ghana Human 2002 [30]
*Mu_DL045 (M. marinum) Greece Fish 2002 [19]
Mu_001506 ITM001506 Wokon, Ouinhi, Zou, Benin Human 2000 This study
Mu_980535 ITM980535 Djigbé, Zé, Atlantique, Benin Human 1998 This study
Mu_000945 ITM000945 Hwegoudo, Zé, Atlantique, Benin Human 2000 This study
Mu_991845 ITM991845 Sagon, Ouinhi, Zou, Benin Human 1999 This study
*Mu_CC240299 (M. marinum) Israel Fish 1999 [19]
*Mu_06-3844 (M. marinum) ITM063844 Belgium Fish 2006 [31]
*Mu_8765 (M. shinshuense) ITM8765 Japan Human 1980 [32]
*Mu_JKD8071 (M. liflandii) 128FXT USA Frog 2004 [33]
*Mu_L15 (M. pseudoshottsii) L15 USA Fish 2004 [17]
Mu_13822-70 Queensland, Australia Human 1971 [34]
Mu_113 05152838 Point Lonsdale, Australia Human 2005 This study
Mu_119 05159089 Frankston, Australia Human 2005 This study
Mu_74 04140710 Point Lonsdale, Australia Human 2004 This study
Mu_81 04149669 Point Lonsdale, Australia Human 2004 This study
Mu_93 05131622 St Leonards, Australia Human 2005 This study
Mu_05142109 East Gippsland, Australia Possum 2005 This study
Mu_JKD8170 Point Lonsdale, Australia Possum 2008 This study
Mu_08009899 Point Lonsdale, Australia Human 2008 This study
Mu_JKD8049 Point Lonsdale, Australia Human 2004 This study
M. marinumisolates
Mm_99/89 NSW, Australia Human 1994 [34]
Mm_99/84 Western Australia Bilby (Macrotis lagotis) 1999 [34]
Mm_99/87 Western Australia Human 1996 [34]
Mm_1726 Louisiana, USA Armadillo 1986 [35]

*These isolates have been referred to by other species names as indicated but here are considered M. ulcerans and have been given the prefix “Mu_”. Note: Additional sequencing and assembly data in Additional file 1: Table S1.

Doig et al.

Doig et al. BMC Genomics 2012 13:258   doi:10.1186/1471-2164-13-258

Open Data