Additional file 1.

Perl program (tagcounter.pl) to parse a MAQ “pileup” file and count the number of reads mapping to each unigene, outputting a read count and calculated RPKM.

Format: TXT Size: 3KB Download file

Higgins et al. BMC Genomics 2012 13:247   doi:10.1186/1471-2164-13-247