Table 1

Experimental design and details of total read counts per individual (after quality control filtering of reads)
Family 1 Family 2
ID IPN phenotype QTL type Library Barcode Total reads (Million) ID IPN phenotype QTL type Library Barcode Total reads (Million)
Sire Unknown RS 1 GAAGC 9.6 Sire Unknown RS 4 GGGGA 14.0
Dam Unknown RS 1 CTGAA 9.2 Dam Unknown RS 4 CGATA 12.4
CR21 Survivor RR 2 GAAGC 2.9 BR01 Survivor RR 5 GAAGC 5.7
CR22 Survivor RR 2 GCATT 1.9 BR02 Survivor RR 5 GTACA 5.9
CR23 Survivor RR 2 GTGTG 2.7 BR03 Survivor RR 5 GTGTG 6.1
CR24 Survivor RR 2 CTAGG 1.7 BR04 Survivor RR 5 GCGCC 5.9
CR25 Survivor RR 3 GGGGA 3.2 BR06 Survivor RR 6 CTAGG 5.2
CR26 Survivor RR 3 GTACA 3.3 BR07 Survivor RR 6 GGAAG 6.4
CR27 Survivor RR 3 CGATA 3.6 BR08 Survivor RR 6 CGGCG 5.1
CS31 Mortality SS 2 GGGGA 2.4 BS11 Mortality SS 6 CTGAA 5.1
CS32 Mortality SS 2 GTACA 2.5 BS12 Mortality SS 6 GTACA 5.6
CS33 Mortality SS 2 CGATA 2.5 BS13 Mortality SS 6 GTGTG 5.4
CS34 Mortality SS 3 CTGAA 3.1 BS14 Mortality SS 6 GCGCC 5.2
CS35 Mortality SS 3 GTGTG 2.7 BS16 Mortality SS 5 GCATT 3.5
CS36 Mortality SS 3 GCGCC 2.8 BS17 Mortality SS 5 CTAGG 3.5
CS37 Mortality SS 3 GGAAG 1.6 BS18 Mortality SS 5 GGAAG 4.5

Houston et al.

Houston et al. BMC Genomics 2012 13:244   doi:10.1186/1471-2164-13-244

Open Data