Table 4

DAVID functional clustering of Xl-PSIDs in the 10th equal tally and 10th equal intensity deciles
4A 10th Equal tally decile
GO terms Number of DAVID IDs
cellular process 366
metabolic process 322
primary metabolic process 287
cellular metabolic process 278
macromolecule metabolic process 204
macromolecular complex 198
cellular macromolecule metabolic process 190
cytoplasmic part 190
biosynthetic process 176
protein metabolic process 175
cellular biosynthetic process 171
cellular protein metabolic process 161
gene expression 138
intracellular non-membrane-bounded organelle 137
non-membrane-bounded organelle 137
cellular macromolecule biosynthetic process 129
macromolecule biosynthetic process 129
structural molecule activity 118
translation 112
ribonucleoprotein complex 93
structural constituent of ribosome 82
Ribosome 82
SP_PIR_Keywords
ribonucleoprotein 55
ribosomal protein 54
KEGG
Ribosome 73
4B 10thEqual intensity decile
GO terms Number of DAVID IDs
translation 26
non-membrane-bounded organelle 26
Intracellular non-membrane-bounded organelle 26
structural constituent of ribosome 25
Ribosome 25
structural molecule activity 25
ribonucleoprotein complex 25
SP_PIR_Keywords
ribosomal protein 16
ribonucleoprotein 15
KEGG
Ribosome 22

The functional clusters with the highest DAVID enrichment scores are shown for Xl-PSIDs in the 10th equal tally (A) and the 10th equal intensity (B) decile. DAVID assigned 905 IDs to the 10th equal tally decile, resulting in 121 annotation clusters. DAVID assigned 35 IDs to the 10th equal intensity decile, resulting in 3 annotation clusters.

Powers et al.

Powers et al. BMC Genomics 2012 13:225   doi:10.1186/1471-2164-13-225

Open Data