Table 2

Salt included changes of protein synthesis
Protein IDs Annotation MapmanBin Normalised protein ratio
0 mM 100 mM 150 mM
up regulated protein ratios 147180 NA NA -3.83 -2.62 -2.15
134305 redox ascorbate and glutathione 21.2.1 -4.54 -2.95 -2.93
131444 S-assimilation, APR 14.2 -2.52 -1.08 -1.05
196360 serine protease 29.5.5 -1.09 0.16 0.16
149072 NA -0.76 1.03 0.49
119219 PGM 4.2 -0.61 0.61 0.58
130434 valine degradation 13.2.4.3 -0.64 0.21 0.48
196738 FAP24 1.40 2.57 2.48
129593 Methionine degradation 13.2.3.4 -0.28 0.75 0.77
185032 NA -0.11 0.98 0.92
162449 Phosphoglycerate dehydrogenase 13.1.5.1.1 0.04 0.96 0.93
24552 Carbonic anhydrase 8.3;8.3 -1.63 -0.76 -0.74
123507 serine protease 29.5.5 -1.25 -0.18 -0.37
187392 Branched chain amino acid synthesis 13.1.4.1 0.13 1.31 1.00
191617 Asparate-tTNA ligase 29.1.12 -0.11 0.74 0.73
137300 Starch phosphoylase 2.2.2.2 0.06 1.15 0.88
123463 Auxin metabolism 17.2.1 -1.31 -0.41 -0.54
195255 Carbamoyl-phosphate synthase 13.1.2.3.11 -1.30 -0.33 -0.54
down regulated protein ratios 126820 Malate dehydrogenase 8.2.10 0.45 -0.70 -0.64
16132 FMG1-2 -2.45 -3.60 -3.54
33411 Oxygen-evolving enhancer protein2 1.1.1.2 0.32 -0.91 -0.81
24392 Protein postranslational modification 29.4 0.65 -0.54 -0.59
1670 Protein targeting secretory pathway 29.3.4.99 1.68 0.56 0.42
148898 HPC2 -0.77 -2.16 -2.03
205988 HSP70g 20.2.1 1.47 -0.07 0.18
205649 PSII polypeptide 1.1.1.2 0.05 -1.21 -1.32
187761 Protein degradation 29.5.9 1.23 -0.05 -0.22
132633 Protein folding 29.6 1.40 -0.18 -0.20
190311 FHA transcription factor 27.3.48 -0.38 -2.07 -2.05
112806 Protein assembly and cofactor ligation 29.8 1.75 -0.47 -0.19
196855 Stress related 20.2.1 1.63 -0.24 -0.31
205900 PSII polypeptide 1.1.1.2 0.90 -1.16 -1.25
183363 LHC-I 1.1.2.1 -1.35 -3.79 -3.85

Proteins with increased or reduced protein ratios at 24 h at the 5% level from 100 mM and 150 mM NaCl compared to proteins from the control culture (0 mM). The measured protein ratios were transformed (z-transformation) to enable a comparison of protein ratios from all conditions.

Mastrobuoni et al.

Mastrobuoni et al. BMC Genomics 2012 13:215   doi:10.1186/1471-2164-13-215

Open Data