Table 4

Multifunctional proteins in A. cellulolyticus vs. C. thermocellum
A. cellulolyticus C. thermocellum
A. Homologous cellulosomal enzymes
GH11-CBM6-Doc-CE4 ZP_09464944 GH11-CBM6-Doc-CE4

Cthe_2972;

XynA/U

PL1-Doc-PL9 ZP_09465691 PL1-Doc-CBM35-PL9 Cthe_2179
CE12-Doc-CBM35-CE12 ZP_09463564 CE12-Doc-CBM35-CE12 Cthe_3141
CE12-Doc-CBM35-CE12 ZP_09465667
B. Non-homologous cellulosomal enzymes
GH5-CBM6-CBM13-CBM62-Doc-CE6 ZP_09463297 CBM30-GH9-GH44-Doc-CBM44

Cthe_0624;

CelJ

GH5-Doc-CE2 ZP_09464730 CBM22-GH10-CBM22-Doc-CE1

Cthe_0912;

XynY

CE1-CBM6-Doc-GH10 ZP_09465552 GH26-GH5-CBM11-Doc

Cthe_1472;

CelH

GH30-CBM42-GH43-Doc Cthe_2139
CE3-CE3-Doc Cthe_0798
C. Non-cellulosomal enzymes
GH48-GH9-CBM3c-CBM3b ZP_09464448
GH18-CE4-GT2 ZP_09465738
GT84-GH94 ZP_09462312

Domain architectures and their corresponding accession numbers or names are listed above. Catalytic modules are marked in bold. GH, glycoside hydrolase; PL, polysaccharide lyase; CE, carbohydrate esterase; CBM, carbohydrate-binding module; GT, glycosyl transferase; Doc, dockerin; numbers indicate family of the indicated module.

Dassa et al.

Dassa et al. BMC Genomics 2012 13:210   doi:10.1186/1471-2164-13-210

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