Table 2

Summary of protein modules in cellulosomal proteins
Cohesins Dockerin- containing proteinsa Modules in dockerin-containing proteins
Catalytic modulesb Structural modulesc CBMsb Cohesins Othersd
A. cellulolyticus 41 143 (5) 74 46 53 13 36
C. thermocellum 29 73 (3) 51 25 47 9 3

a Numbers in parenthesis indicate the number of X60-dockerin modular pairs in the given species.

b Catalytic modules, such as: GH, PL, CE, and CBMs according to CAZy (http://www.cazy.org/ webcite).

c Structural domains are defined in Pfam (http://pfam.sanger.ac.uk/ webcite), such as: FN3, GDSL, SNGH, CotH, TRX-like, Kelch-like, SLH, RshA, LRR, PKD.

d Others include Pfam domains such as peptidases, serpins, DUF303, DUF1565, DUF3237.

Dassa et al.

Dassa et al. BMC Genomics 2012 13:210   doi:10.1186/1471-2164-13-210

Open Data