Table 1

Libraries, sequencing metrics and assembly
A: Tissue and sequencing platform
Tissue source Illumina (reads) 454 Sanger
(reads) (reads)
Midgut 210 x106 62,703c,e 1,017
Abdominal cuticlea 111,566c 605
Dorsal vessel 233,984d
Salivary gland 1,038
Whole femaleb 2,121
Totals 210 x106 408,253 4,781
B: Transcript composition
Transcripts (%)
Transcripts with Illumina reads 15,764 94.4
Transcripts with 454 reads 8,060 48.3
Transcripts with Sanger reads 1,051 6.3
C: Transcript assembly summary
Total transcripts 16,699
Total bases (Mbp) 16.1
Mean contig length (bp) 970
N50 (bp) 1,434

a Includes abdominal fat body.

b Inoculated with S. marcescens.

c Flx. 250 bp read length.

d Titanium 400 bp read length.

eP. vivax infected and non-infected.

Martínez-Barnetche et al.

Martínez-Barnetche et al. BMC Genomics 2012 13:207   doi:10.1186/1471-2164-13-207

Open Data