Table 4

Summary of transitions and transversions across Bing and Rainier

Transitions


C/T

598


G/A

595


Total

1193


Transversions


A/C

242


A/T

348


C/G

158


G/T

298


Total

1046


Each SNP was classified based on the base change that occurred. The total number of transitions (a sum of the C/T SNPs and A/G SNPs) is 1193 which is marginally greater than total number of transversions (A/C + A/T + C/G + G/T) which is 1046. The R value (transitions/transversions) is 1.14 as expected within a species.

Koepke et al. BMC Genomics 2012 13:18   doi:10.1186/1471-2164-13-18

Open Data