Additional file 5.
Filtered SNP report. This table is modified output generated from NGen v3.0 and SeqMan. The contig number and all details about the SNP are given including number of calls for each base at the given position from Columns B-L. Column M is the 5' flanking sequence. Column N is the polymorphism. Column O is the 3' flanking sequence. Columns M and O have been provided to enable rapid analysis of other germplasm.
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Koepke et al. BMC Genomics 2012 13:18 doi:10.1186/1471-2164-13-18