Table 2

Variants detected across the 1.5Mb of targeted sequence

Shared between pools

Unique in Low CIV pool2

Unique to High CIV pool2


SNP

Indel

SNP

Indel

SNP

Indel


5' and 3' UTR

547

86

93

50

118

58

Exonic1

278 (153)

29

57 (38)

17

65 (45)

19

Intronic

2226

277

310

189

441

168


1: Numbers in parenthesis represent the number of SNPs resulting in non synonymous substitutions; 2: Variants classified as unique represent variants undetected in the corresponding pool.

Mullen et al. BMC Genomics 2012 13:16   doi:10.1186/1471-2164-13-16

Open Data