Additional file 7.

Figure S6. Detailed plots for novel putative enhancer regions. Detailed coverage plots of novel enhancer regions identified including (A) multiple putative enhancers upstream of miR-290 cluster, (B) multiple contiguous enhancer regions upstream of Tet1 and around a non-coding small nuclear RNA, U6, (C) two putative enhancers around Zic3, and d) the putative enhancer region located 10kb upstream of C80913. The Enh and PrL probabilities of 1kb bins are shown in red and blue bars, respectively. Only bins with probabilities greater than 0.8 are displayed for higher stringency, and the y-axis scale is from 0.5 to 1. Transcription factors peaks identified using the SISSRs algorithm are illustrated in rectangle boxes to demonstrate overlaps of the enhancers with TFs.

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Chen et al. BMC Genomics 2012 13:152   doi:10.1186/1471-2164-13-152