Table 1

Summary of SSR and SNP Marker

Type of Marker

Number of primer pairs/SNPs

Number of amplicons

Polymorphic amplicons

Markers polymorphic in Undine

Markers polymorphic in Grosse Fontaine

Markers polymorphic in both parents


Segregation ratio


1:1

> 2:1

1:1

> 2:1

3:1

> 10:1

1:2:1


EST

SSRs

29

91

73

33

21

2

15

2


Genomic SSRs

78

210

137

48

2

50

25

12


SNPs

1536

n/a

n/a

238

16

212

1

191


Total

n/a

n/a

318

17

280

0

40

0

191


Swaminathan et al. BMC Genomics 2012 13:142   doi:10.1186/1471-2164-13-142

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