Table 2

Directional allelic effect in CviCol

GO term

Genes/term

eQTLs observed

Col up-regulated alleles

Cvi up-regulated alleles

P-value (directional allelic effect)


defense response

582

58

50

8

0.00002


response to far-red light

42

8

8

0

0.02


plant-type hypersensitive response

37

11

10

1

0.03


response to fungus

35

7

7

0

0.03


response to oxidative stress

231

23

18

5

0.04


response to hypoxia

20

6

6

0

0.05


GO terms showing a significant directional allelic effect. The number of genes per term, eQTLs observed and number of up-regulating allele from each parent is shown, as well as the P value associated with the allelic bias

Cubillos et al. BMC Genomics 2012 13:117   doi:10.1186/1471-2164-13-117

Open Data