Scaffolds of the Actinoplanes sp. SE50/110 genome. (A) The eight paired end (PE) scaffolds resulting from Newbler assembly of all paired end and whole genome shotgun reads are shown. Every second contig is visualized in a slightly displaced manner to show contig boundaries. (B) The three scaffolds resulting from terminal insert sequencing of fosmid (FO) clones and subsequent mapping on the PE scaffolds are presented. All overlapping sequences of the 609 mapped fosmid clones are shown on top of the PE/FO scaffolds.
Schwientek et al. BMC Genomics 2012 13:112 doi:10.1186/1471-2164-13-112