Number of genes showing expression changes (up- or down- regulation) under different effective gravity (g*) and magnetical/mechanical conditions. Number of genes up- or down- regulated was determined using both a raw limma p value < 0.01 (above the diagonal line) and a corrected FDR Rankprod p value < 0.05 (below the diagonal line) by FIESTA viewer v.1.0. Total number of genes up- or down-regulated is shown in bold. In diagonal (grey shaded) we show the number of gene expression changes in each condition (up-regulated/down-regulated genes between brackets). Other cells show the number of genes in common between two conditions (up-regulated in both/up-regulated in the column condition & down-regulated in the row condition/down-regulated in the column condition & up-regulated in the row condition/down-regulated in both conditions between brackets). This information has been extracted from Additional files 2 and 3 tables containing quantitative expression data for these probe sets and the list of common genes in more than one condition using limma p value filter and also FDR (RankProd) filter.
Manzano et al. BMC Genomics 2012 13:105 doi:10.1186/1471-2164-13-105