Table 1

Mean values and standard errors of hs_hr and ms_hr.

DATA SET

GENE SELECTION METHOD

MEAN(HS_HR) ± STD(HS_HR), %

MEAN(MS_HR) ± STD(MS_HR), %


NMSC

SVM

NBC

RF

NMSC

SVM

NBC

RF


Leukemia

NBC-MMC

99.9 ± 0.6

99.4 ± 1.2

98.3 ± 2.3

98.4 ± 1.4

98.1 ± 1.4

93.4 ± 2.8

94.3 ± 2.8

95.6 ± 2.3

NMSC-MMC

99.9 ± 0.6

99.1 ± 1.3

98.4 ± 1.9

98.6 ± 1.9

97.9 ± 1.2

93.3 ± 2.8

95.2 ± 2.8

95.7 ± 3.4

NBC-MSC

99.4 ± 1.1

99.1 ± 1.3

98.9 ± 1.4

98.4 ± 1.7

98.5 ± 1.6

94.9 ± 2.7

94.6 ± 2.7

96.0 ± 2.5

NMSC-MSC

99.7 ± 0.9

99.6 ± 1.0

98.6 ± 1.7

98.7 ± 1.7

97.7 ± 1.4

94.8 ± 2.5

94.6 ± 3.4

95.7 ± 3.1

GLGS

99.6 ± 1.0

98.9 ± 1.7

98.6 ± 1.7

98.6 ± 1.7

97.8 ± 1.7

92.5 ± 3.8

95.3 ± 1.8

95.0 ± 2.5

LOOCSFS

97.1 ± 3.3

98.0 ± 1.5

97.7 ± 1.9

99.3 ± 1.2

93.9 ± 3.5

94.8 ± 3.1

94.5 ± 2.7

96.7 ± 1.6

SVMRFE

98.0 ± 2.0

95.4 ± 3.9

97.3 ± 2.1

98.0 ± 2.0

95.7 ± 2.8

92.5 ± 5.2

92.5 ± 3.0

93.4 ± 1.9

SFFS-LSBOUND

97.1 ± 2.5

97.4 ± 3.8

96.3 ± 4.1

97.1 ± 2.8

93.8 ± 4.3

92.9 ± 3.8

90.2 ± 5.8

92.6 ± 4.1

SFS-LSBOUND

97.1 ± 2.8

97.0 ± 3.0

96.4 ± 3.6

97.3 ± 3.0

94.6 ± 3.5

93.6 ± 3.8

91.2 ± 5.0

93.0 ± 5.1

T-TEST

94.8 ± 3.5

95.4 ± 4.5

93.3 ± 6.9

96.8 ± 2.9

92.2 ± 3.9

90.7 ± 4.8

90.1 ± 6.5

93.5 ± 3.6


Lymphoma

NBC-MMC

98.1 ± 2.6

99.0 ± 1.3

97.3 ± 2.6

96.4 ± 2.8

96.2 ± 4.3

93.8 ± 2.8

91.7 ± 3.9

91.6 ± 3.7

NMSC-MMC

99.2 ± 1.2

98.8 ± 1.6

97.9 ± 2.6

96.5 ± 3.7

96.9 ± 1.9

93.0 ± 2.8

93.1 ± 3.3

92.3 ± 4.0

NBC-MSC

99.4 ± 1.1

98.4 ± 1.8

97.9 ± 2.6

96.8 ± 3.3

97.5 ± 1.9

93.1 ± 3.5

92.7 ± 3.5

92.6 ± 4.1

NMSC-MSC

99.5 ± 1.1

98.8 ± 1.6

98.1 ± 2.0

97.0 ± 3.6

97.2 ± 1.9

93.9 ± 3.0

93.9 ± 3.1

93.4 ± 3.9

GLGS

98.6 ± 1.8

98.2 ± 1.9

97.0 ± 2.6

96.9 ± 2.3

96.5 ± 2.1

92.5 ± 3.8

92.3 ± 3.6

91.7 ± 2.9

LOOCSFS

87.0 ± 7.2

93.0 ± 5.3

87.3 ± 5.1

92.9 ± 4.8

85.8 ± 6.8

87.8 ± 5.4

85.1 ± 4.5

88.2 ± 4.3

SVMRFE

99.2 ± 1.5

96.5 ± 3.9

97.2 ± 3.4

96.6 ± 3.1

96.5 ± 2.0

91.8 ± 4.3

93.1 ± 4.0

93.3 ± 4.0

SFFS-LSBOUND

88.7 ± 6.1

95.1 ± 3.3

84.0 ± 4.9

92.2 ± 4.7

87.0 ± 5.7

88.2 ± 4.9

80.6 ± 3.9

86.8 ± 4.8

SFS-LSBOUND

87.7 ± 6.1

96.1 ± 3.5

86.1 ± 3.5

91.8 ± 4.2

86.4 ± 5.6

91.1 ± 3.7

82.7 ± 3.4

86.1 ± 4.8

T-TEST

86.0 ± 5.7

94.4 ± 3.0

86.5 ± 7.0

91.7 ± 5.2

84.3 ± 5.8

87.7 ± 3.3

83.9 ± 6.1

87.2 ± 4.5


Prostate

NBC-MMC

96.3 ± 2.4

95.8 ± 2.5

94.8 ± 2.6

96.5 ± 2.0

94.2 ± 2.8

91.6 ± 2.3

90.4 ± 2.7

92.1 ± 2.2

NMSC-MMC

95.6 ± 2.3

95.9 ± 2.5

93.7 ± 2.8

95.3 ± 2.3

92.7 ± 2.3

91.4 ± 2.8

90.7 ± 3.1

91.3 ± 2.3

NBC-MSC

96.4 ± 2.0

96.6 ± 1.9

95.2 ± 2.1

96.5 ± 1.9

94.6 ± 2.3

92.5 ± 2.3

91.0 ± 2.3

92.5 ± 2.2

NMSC-MSC

96.9 ± 2.3

96.7 ± 1.7

94.5 ± 2.0

95.8 ± 1.8

94.5 ± 2.4

92.8 ± 1.9

91.8 ± 2.5

92.0 ± 1.9

GLGS

93.6 ± 3.0

96.1 ± 2.2

90.4 ± 3.9

94.7 ± 2.0

91.5 ± 2.7

91.7 ± 2.6

87.5 ± 3.4

90.0 ± 2.5

LOOCSFS

88.4 ± 5.2

94.9 ± 2.9

90.7 ± 5.3

95.2 ± 2.6

87.0 ± 4.7

91.1 ± 3.4

88.0 ± 4.5

92.3 ± 2.3

SVMRFE

94.1 ± 3.4

92.3 ± 2.7

92.8 ± 4.3

95.7 ± 2.6

92.4 ± 3.3

86.7 ± 3.5

90.0 ± 4.0

92.5 ± 2.8

SFFS-LSBOUND

90.4 ± 3.2

93.4 ± 2.8

86.2 ± 5.8

90.2 ± 3.2

88.9 ± 3.1

86.0 ± 3.2

84.4 ± 5.1

86.1 ± 4.0

SFS-LSBOUND

89.7 ± 4.9

92.7 ± 4.0

87.3 ± 5.4

92.4 ± 3.5

88.3 ± 5.1

87.2 ± 5.0

85.1 ± 5.4

89.0 ± 3.9

T-TEST

91.4 ± 4.1

92.5 ± 2.1

91.7 ± 2.8

94.0 ± 3.0

89.7 ± 3.7

87.1 ± 3.2

89.0 ± 4.3

91.0 ± 3.1


Colon

NBC-MMC

88.7 ± 5.5

87.7 ± 5.2

86.5 ± 4.0

89.7 ± 4.9

84.5 ± 5.2

80.9 ± 6.0

78.2 ± 4.9

82.5 ± 5.5

NMSC-MMC

91.1 ± 5.0

87.7 ± 3.9

87.4 ± 5.3

90.0 ± 4.0

84.9 ± 7.1

81.3 ± 5.5

80.8 ± 5.9

83.3 ± 5.4

NBC-MSC

89.4 ± 4.3

86.9 ± 4.6

88.7 ± 6.0

90.0 ± 4.0

86.0 ± 5.2

80.3 ± 5.6

82.1 ± 4.8

84.4 ± 4.7

NMSC-MSC

91.0 ± 5.3

87.6 ± 4.7

88.1 ± 3.3

90.0 ± 4.4

86.0 ± 5.4

80.9 ± 5.5

82.6 ± 4.0

83.9 ± 4.5

GLGS

87.3 ± 6.2

87.3 ± 4.6

85.2 ± 4.8

90.5 ± 4.3

83.7 ± 6.6

81.2 ± 5.5

77.6 ± 5.8

83.0 ± 4.5

LOOCSFS

85.0 ± 5.3

86.3 ± 3.9

81.6 ± 5.8

86.8 ± 5.3

82.2 ± 4.6

79.3 ± 5.2

76.7 ± 6.9

80.3 ± 5.3

SVMRFE

86.0 ± 6.7

86.8 ± 4.8

82.1 ± 7.4

86.3 ± 5.5

81.8 ± 7.2

80.7 ± 4.7

77.7 ± 7.5

80.3 ± 6.0

SFFS-LSBOUND

85.0 ± 4.8

87.1 ± 4.4

72.7 ± 7.0

82.6 ± 6.0

82.4 ± 4.4

76.2 ± 6.3

69.5 ± 8.3

74.6 ± 6.8

SFS-LSBOUND

85.3 ± 4.6

85.8 ± 5.3

76.8 ± 7.1

86.0 ± 4.1

83.3 ± 4.7

77.7 ± 6.4

72.5 ± 6.2

77.6 ± 4.5

T-TEST

77.4 ± 10.4

85.5 ± 4.0

76.3 ± 8.3

81.5 ± 7.2

74.9 ± 10.8

75.3 ± 5.7

72.8 ± 8.2

75.1 ± 7.8


CNS

NBC-MMC

91.8 ± 6.1

92.9 ± 3.6

77.8 ± 5.2

85.7 ± 4.0

86.7 ± 6.0

82.4 ± 4.7

67.3 ± 4.1

76.3 ± 4.0

NMSC-MMC

90.0 ± 6.4

92.2 ± 5.7

78.0 ± 5.3

82.7 ± 5.2

82.8 ± 6.8

82.1 ± 5.6

67.5 ± 5.5

73.5 ± 4.9

NBC-MSC

94.0 ± 4.6

92.0 ± 4.4

81.1 ± 4.1

85.5 ± 4.9

88.4 ± 5.2

82.6 ± 5.5

70.2 ± 3.7

75.9 ± 5.3

NMSC-MSC

92.8 ± 4.0

91.6 ± 4.9

81.3 ± 6.1

84.9 ± 4.1

85.6 ± 4.3

81.4 ± 6.2

70.0 ± 4.5

74.4 ± 4.2

GLGS

84.7 ± 3.3

91.1 ± 5.4

78.8 ± 5.5

84.2 ± 5.0

82.4 ± 3.6

81.3 ± 4.8

67.9 ± 4.5

75.3 ± 4.3

LOOCSFS

71.3 ± 9.8

85.0 ± 5.9

79.1 ± 7.7

83.2 ± 4.4

69.3 ± 8.0

77.6 ± 4.5

71.8 ± 6.2

75.3 ± 5.1

SVMRFE

83.2 ± 8.9

85.1 ± 8.4

77.1 ± 6.8

83.5 ± 4.3

77.0 ± 8.0

75.0 ± 8.8

65.7 ± 7.2

73.3 ± 4.9

SFFS-LSBOUND

68.1 ± 6.7

71.9 ± 7.1

67.6 ± 7.7

76.2 ± 4.5

65.3 ± 6.3

59.4 ± 7.5

61.3 ± 6.1

66.9 ± 4.8

SFS-LSBOUND

67.8 ± 6.2

72.4 ± 4.9

69.8 ± 8.2

76.2 ± 5.0

65.7 ± 5.4

60.7 ± 5.1

63.7 ± 7.2

68.4 ± 4.5

T-TEST

67.5 ± 8.8

77.4 ± 6.4

67.0 ± 7.1

75.5 ± 5.9

63.4 ± 7.6

67.3 ± 5.8

60.9 ± 6.8

67.8 ± 4.9


Breast

NBC-MMC

82.5 ± 6.0

82.9 ± 3.5

84.1 ± 3.0

84.1 ± 3.6

81.3 ± 5.7

73.2 ± 3.8

78.4 ± 3.4

78.4 ± 3.8

NMSC-MMC

83.9 ± 4.6

82.0 ± 3.3

82.4 ± 4.3

83.7 ± 4.7

80.4 ± 4.0

72.0 ± 3.8

78.4 ± 4.3

77.0 ± 4.3

NBC-MSC

83.4 ± 5.8

83.5 ± 3.8

85.8 ± 3.1

85.9 ± 4.7

81.5 ± 5.3

74.9 ± 3.3

79.1 ± 3.0

79.4 ± 4.1

NMSC-MSC

82.8 ± 4.4

82.4 ± 3.8

84.1 ± 4.0

83.9 ± 4.0

79.6 ± 4.0

73.7 ± 3.9

79.2 ± 3.8

77.7 ± 4.0

GLGS

80.8 ± 3.7

79.3 ± 4.5

81.4 ± 4.1

83.7 ± 4.6

79.2 ± 3.9

70.7 ± 4.6

77.8 ± 3.7

77.0 ± 4.2

LOOCSFS

71.7 ± 6.5

77.3 ± 5.2

78.0 ± 5.8

80.3 ± 3.8

70.4 ± 6.5

69.2 ± 4.7

74.7 ± 5.1

74.3 ± 4.2

SVMRFE

74.3 ± 7.1

78.3 ± 5.2

77.2 ± 5.3

80.4 ± 4.1

73.2 ± 6.6

72.1 ± 5.8

73.9 ± 4.5

73.9 ± 3.7

SFFS-LSBOUND

76.2 ± 5.2

78.9 ± 2.8

76.9 ± 7.3

81.5 ± 5.3

75.0 ± 5.3

67.8 ± 3.3

75.2 ± 6.8

75.6 ± 4.9

SFS-LSBOUND

77.5 ± 5.6

78.9 ± 4.2

79.8 ± 5.2

81.3 ± 5.2

75.8 ± 5.5

68.0 ± 4.7

76.9 ± 6.3

75.4 ± 5.2

T-TEST

71.1 ± 5.3

77.6 ± 5.2

72.6 ± 6.3

76.3 ± 5.7

69.3 ± 5.3

69.9 ± 3.6

70.5 ± 5.8

71.1 ± 5.8


In each data set, the highest mean value is highlighted in bold

Liu et al. BMC Genomics 2011 12(Suppl 5):S1   doi:10.1186/1471-2164-12-S5-S1

Open Data