Table 3

EA 2018 putative promoter variations related to key phenotypes

Gene locus in EA 2018

Gene locus in ATCC 824

Gene variation sites in EA 2018

Gene variation sites in ATCC 824

Product Name


Solvent formation related genes


CEA_G0028

CAC0028

-12(T)

-12(C)

Hydrogen dehydrogenase

CEA_P0034

CA_P0035

-84(T)

-84(C)

Aldehyde-alcohol dehydrogenase, ADHEII


Substrate utilization related genes


CEA_G3043

CAC3037

-80(T)

-80(C)

Catabolite control protein, LacI family transcriptional regulator

CEA_G3455

CAC3451

-84(T)

-84(G)

Sugar/Na+(H+) simporter

CEA_G1086

CAC1075

-56(T)

-56(G)

Beta-glucosidase family protein

CEA_G1365

CAC1351

-97(T)

-97(C)

Periplasmic sugar-binding protein


Sporulation related genes


CEA_G1634

CAC1620

-136(T)

-136(G)

Small acid-soluble spore protein

CEA_G3742

CAC3735

-(8-7)(-)

-7(C)

Predicted RNA-binding protein Jag, SpoIIIJ-associated


Numbers in gene or protein variation sites lines indicated the variation sites in genes; the letters in bracket means the corresponding variation bases or amino acid; the symbol "-" means deletion in genes.

Hu et al. BMC Genomics 2011 12:93   doi:10.1186/1471-2164-12-93

Open Data