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Resolution: standard / high Figure 2.
Comparison of orthologous CDSs between W, K-12, B and Crooks strains. The number of shared genes, as well and the number of unique genes and genes shared
between one, two, and three strains are shown. All-against-All BLASTP for amino acids
(E-value ≤ 1E-5, identity ≥ 90%, coverage ≥ 80%) was used to assign orthologs. Total
CDS counts for K-12, B & Crooks differ by 8, 14 & 5 respectively as some CDSs had
more than one ortholog in another genome (Additional File 1).
Archer et al. BMC Genomics 2011 12:9 doi:10.1186/1471-2164-12-9 |