Table 4

Annotation of cowpea ESTs harboring SNP markers associated with Macrophomina resistance QTL

SNP marker

Cowpea EST accession number

Best Annotated EMBL hit

E score

Annotation


1_0709

FF388857

DQ446394

3.00E-42

Arabidopsis thaliana MATE efflux family protein

1_0551

FG940166

BE554813

4.90E-92

Glycine max Endo-xyloglucan transferase

1_0853

FG876090

EE127646

6.84E-74

Glycine max Pectinesterase inhibitor

1_0604

FG841619

BE190146

2.90E-72

Glycine max Pectinacetylesterase precursor

1_0464

FF544070

CA905170

6.60E-115

Phaseolus coccineus Ribosomal protein L7Ae

1_0201

FG818679

AB210817

1.50E-64

Arabidopsis thaliana Cell growth defect factor 1

1_0079

FG880038

AF145386

3.90E-84

Phaseolus vulgaris CA2+- binding protein 1

1_0496

FG909180

AB027154

3.10E-96

Vigna unguiculata Pathogenesis related protein 3

1_0699

FF382329

BG238363

3.30E-114

Glycine max Tropinone reductase homolog

1_0804

FC458836

BQ296449

1.90E-96

Glycine max Putative Chlorophyll binding protein

1_0678

FG823412

AB070752

1.00E-132

Vigna angularis Glycosyltransferase

1_0153

FC457603

FJ461591

9.20E-29

Brassica napus Chloroplast Lipase

1_0030

FG935301

AJ133146

1.60E-32

Persea Americana Fructose-bisphosphate aldolase

1_0032

FG886549

CA907484

5.80E-59

Phaseolus coccineus Protein transport protein SEC61

1_1533

FF549040

XP002881680

2.00e-95

Arabidopsis thaliana Integral membrane Yip1 family protein


Muchero et al. BMC Genomics 2011 12:8   doi:10.1186/1471-2164-12-8

Open Data