Table 2 |
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|
Differentially co-expressed modules defined by CoXpress1 |
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|
Module |
Gene no. |
P-value2 |
P-value2 |
Mean correlation |
Mean correlation |
Mean correlation difference |
|
|
||||||
|
LM |
HM |
LM |
HM |
HM - LM |
||
|
|
||||||
|
VioletDiff |
51 |
0.61 |
0.00 |
0.03 |
0.59 |
+ 0.56 |
|
LightgreenDiff |
103 |
0.00 |
0.66 |
0.39 |
0.02 |
- 0.37 |
|
SalmonDiff |
126 |
0.00 |
0.77 |
0.37 |
0.01 |
- 0.36 |
|
GreenyellowDiff |
141 |
0.00 |
0.88 |
0.30 |
0.03 |
- 0.27 |
|
OrangeDiff |
74 |
0.02 |
1.00 |
0.27 |
0.01 |
- 0.26 |
|
|
||||||
|
1A module was differentially co-expressed when the pairwise correlations were not random in one condition (p < 0.05) and random in the other condition (p > 0.3) [6]. The conditions were high or low sire EBV status for EMD. HM, high muscling EBV; LM, low muscling EBV. 2The P-value is a measure of the significance that a module differs from random. |
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|
Kogelman et al. BMC Genomics 2011 12:607 doi:10.1186/1471-2164-12-607 |
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