Additional file 5.

Hierarchical tree graphs of over-represented GO terms for genes in the VioletWGCNA module. Hierarchical tree graphs of over-represented gene ontology (GO) terms for genes in the VioletWGCNA module were constructed using AgriGO [16]. Boxes in the graphs represent GO terms labelled by GO number, term definition and statistical information. The analysis was performed using less stringent parameters (adjusted P < 0.1 and ≥ 2 genes/term) than the default parameters. Significant terms are coloured. The degree of colour saturation of a box is positively correlated to the enrichment level of the term. Solid, dashed, and dotted lines represent two, one and zero enriched terms at both ends connected by the line, respectively. GO categories: (a) Biological Process; (b) Cellular Component.

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Kogelman et al. BMC Genomics 2011 12:607   doi:10.1186/1471-2164-12-607