Splice donor and acceptor analysis. Top: consensus sequence obtained from the alignment of all the 3'UTR genomic sequences (total number: 168) indicating the identity level below each position (green: highest, red: lowest). The different donor (D) and acceptor (A) positions are indicated. Bottom: schematic representation of the different splicing variants. Dash arrow represents the HeT-A 3'UTR. Black arrows indicate the primers used for amplification. Underneath, bullets identify splicing donors (D) and squares identify acceptors (A).
Piñeyro et al. BMC Genomics 2011 12:573 doi:10.1186/1471-2164-12-573