Table 1

Genome-wide analysis of the number and lengths of DNA fragments bound by the proteins represented within interband regions

Fragment lengths (in kb)


Protein

1-3

4-6

7-9

10-11


Number of fragments (%)


RNA pol II

4760(72.6)

1288(19.6)

396(6.0)

111(1.7)

CHRIZ

3045(67.7)

1103(24.5)

264(5.9)

89(2.0)

WDS

4639(89.8)

484(9.4)

41(0.8)

4(0.1)

ORC2

4178(84.4)

651(13.1)

108(2.2)

16(0.3)

H1_dip

3543(76.3)

796(17.1)

237(5.1)

68(1.5)

PC

1491(72.6)

373(18.2)

138(6.7)

52(2.5)

GAF

2909(80.2)

591(16.3)

110(3.0)

16(0.4)

CP190

4982(86.1)

714(12.3)

81(1.4)

11(0.2)

BEAF-32

4060(88.0)

499(10.8)

53(1.1)

4(0.1)

CTCF

1446(75.3)

405(21.1)

62(3.2)

7(0.4)

MOD(MDG4)

843(98.9)

9 (1.1)

0(0.0)

0(0.0)

Su(Hw)

2829(69.6)

1020(25.1)

178(4.4)

36(0.9)

dMi-2

3802(83.2)

625(13.7)

118(2.6)

23(0.5)

NURF301

5336(87.0)

680(11.1)

101(1.6)

13(0.2)

BRE1

5245(87.7)

675(11.3)

54(0.9)

7(0.1)

Trx-C

4885(93.6)

319(6.1)

16(0.3)

0(0.0)

dRing

2019(88.4)

198(8.7)

55(2.4)

13(0.6)

E(Z)

760(83.6)

113(12.4)

27(3.0)

9(1.0)


Demakov et al. BMC Genomics 2011 12:566   doi:10.1186/1471-2164-12-566

Open Data