Table 2

A summary of expressed gene variants and their synonymous/non-synonymous substitution rates

Gene

Copies

Alignment length (bp)

dS

dN

dN/dS


Phosphoribosylaminoimidazole-succinocarboxamide synthase

27

561

0.038 ± 0.011

0.0039 ± 0.002

0.123 ± 0.062

3-dehydroquinate synthase/O-methyltransferase fusion

12

408

0.0304 ± 0.012

0.008 ± 0.003

0.3294 ± 0.152

Heat shock protein 70

8

1353

0.0218 ± 0.006

0.0004 ± 0.004

0.0330 ± 0.0032

Calmodulin

6

447

0.0221 ± 0.0116

-

-

S-adenosylmethionine synthetase

5

1302

0.0294 ± 0.0082

0.0007 ± 0.0007

0.0226 ± > 0.0001

Chlorophyll a-b binding protein 25

2

213

0.122

0.009

0.076

Deoxyribonuclease-2-alpha

2

459

0.163

0.020

0.122

Glucose dehydrogenase

2

432

0.205

0.006

0.029

Heat shock protein 90

2

198

0.235

-

-

WD repeat-containing protein

2

190

0.170

-

-


Lowe et al. BMC Genomics 2011 12:519   doi:10.1186/1471-2164-12-519

Open Data