Additional file 2.

CNM SNPs in LD with GWAS SNPs. CNM SNPs in LD with variants association with disease traits. All CNM SNP minor allele frequencies (MAF) reported are for the CEU pilot panel of the 1000 Genomes Project, except where indicted. * indicates MAF in low coverage 1000genomes CEU panel. Abbreviations: GWAS SNP = SNP reported in GWAS, Proxy = CNM SNP in LD with GWAS SNP, SNP coord = genomic coordinate of CNM SNP, PMID = PubMed accession, PS = miRanda Pairing Score, ES = miRanda energy score, S-T = seed type.

Format: XLS Size: 78KB Download file

This file can be viewed with: Microsoft Excel Viewer

Richardson et al. BMC Genomics 2011 12:504   doi:10.1186/1471-2164-12-504