Table 2

FetGOat enrichment analysis of maltose-induced genes

Transcripts


GO term

Description

FDR

Ontology

Induced

Predicted


Translocation to ER

GO:0031204

posttranslational protein targeting

2.7E-04

BP

6

6

GO:0031207

Sec62/Sec63 complex

6.1E-03

CC

3

3

GO:0005787

signal peptidase complex

6.1E-03

CC

3

3

GO:0006616

SRP-dependent cotranslational protein targeting

1.7E-02

BP

4

5

GO:0051605

protein maturation by peptide bond cleavage

1.6E-02

BP

5

8

Glycosylation in ER

GO:0005788

endoplasmic reticulum lumen

3.3E-03

CC

4

5

GO:0008250

oligosaccharyltransferase complex

6.9E-03

CC

4

6

GO:0006487

protein amino acid N-linked glycosylation

4.2E-02

BP

8

24

GO:0016758

transferase activity, transferring hexosyl groups

3.4E-02

MF

14

54

Transport between ER and golgi

GO:0030126

COPI vesicle coat

1.3E-02

CC

4

7

GO:0030127

COPII vesicle coat

6.9E-03

CC

4

6

GO:0006888

ER to Golgi vesicle-mediated transport

4.8E-03

BP

22

92

GO:0030173

integral to Golgi membrane

12.0E-02

CC

5

12

Starch metabolism

GO:0005982

starch metabolic process

4.2E-02

BP

5

10

Miscellaneous

GO:0006066

alcohol metabolic process

4.2E-02

BP

33

199

GO:0003756

protein disulfide isomerase activity

8.2E-03

MF

4

4

GO:0006083

acetate metabolic process

4.2E-02

BP

7

19

GO:0015812

gamma-aminobutyric acid transport

4.2E-02

BP

6

14

GO:0015935

small ribosomal subunit

5.6E-03

CC

12

44


Most specific GO terms identified by FetGOat as being enriched in the maltose-induced gene set. GO terms were grouped in five arbitrary categories: Translocation into endoplasmic reticulum (ER), glycosylation in ER, transport between ER and golgi, starch metabolism and miscellaneous.

Nitsche et al. BMC Genomics 2011 12:486   doi:10.1186/1471-2164-12-486

Open Data