Table 1

Summary of contig statistics resulting from Illumina deep sequencing of parasitized and non-parasitized P. xylostella larvae

Parameters

Number


Total de novo assembled contigs with CLC software

172,660

Contigs used for BLAST (cut-off: above 200 bp length)

59,255

Best BLAST matches (cut-off: E-value > E-6)

26119

No Hits (contigs without any BLAST match)

33136

Not mapped with any Gene Ontology (GO) database

6087

Annotated sequences (cut off: GO weight 5E value > E-6)

20704


Etebari et al. BMC Genomics 2011 12:446   doi:10.1186/1471-2164-12-446

Open Data