Additional file 5.

Comparison of three repeat masking settings. The table shows the percentages of WSSD-negative (green), borderline (gray) and positive (red) 5 kub windows among all windows in the grapevine genome and in five subgroups, defined by the percentage of masked sequence in the window. The percentages are given for the three repeat masking settings "div10_low", "nodiv_low" and "nodiv_N".

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Giannuzzi et al. BMC Genomics 2011 12:436   doi:10.1186/1471-2164-12-436