Table 5

PA sigma factor genes in the Bc species-group compared to B. subtilis

PA Locus tag

BAS

GBAA

BA

BAA

BAMEG

BCAH820

BACl

BT

BALH

BCA

BCZK

BCAH187

BMB

BCQ

BCE

BCG

BCB

BC

KBAB

Bcer98

BSU

Orthologous BSU locus tag


BAS4194

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

BSU25200 (SigA)

BAS0928

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

BSU04730 (SigB)

+

BSU16470 (SigD)

BAS3755

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

BSU15320 (SigE)

BAS3983

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

BSU23450 (SigF)

BAS3754

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

BSU15330 (SigG)

BAS0093

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

BSU00980 (SigH)

BAS3231

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

BSU13450 (SigI)

BAS4236

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

BSU25760, BSU26390 (SigK)

BAS3522

+

+

+

+

+

+

+

+

BSU12560 (Xpf)

BAS3823

+

+

+

+

+

BAS5102

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

Bcer98_2607

+

BCG9842_0035

+

BMB171_P0077

+

+


A '+' designates the presence of a PA sigma factor ortholog group. The PA locus tag shown is from B. anthracis strain Sterne, unless this gene was not found in that organism. In those instances another locus tag was chosen as a representative. Genome abbreviations are as in Table 1.

Schmidt et al. BMC Genomics 2011 12:430   doi:10.1186/1471-2164-12-430

Open Data