Table 4

HLA alleles originally mistyped in the gold standard dataset

Population

Occurrences

454 type

Original type

Difference(s)


YRI

11

C*02:10

C*02:02

31346962 T>C


CHB/JPT

10

A*02:07

A*02:01

30019048 A>T


JPT

2

C*08:03

C*08:01

31346853 C>T


CEU

2

C*07:01

C*07:02

31347428 C>G


YRI

2

A*66:03

A*66:02

30018721 G>C


YRI

2

A*36:03

A*36:01

30019043 A>G


JPT

2

A*26:02

A*26:01

30018098 G>A


CEU

1

C*06:06

C*06:02

31346910 A>G


CEU

1

C*05:01

C*16:01

31347486 A>T

31347396 A>T

31347522 A>T


CEU

1

C*03:04

C*03:03

31347355 C>T


JPT

1

C*01:03

C*01:02

31347029 T>A

31347036 A>T


YRI

1

B*39:24

B*39:03

31432177 G>A


CEU

1

B*39:06

B*39:05

31432180 G>C

31432185 C>G

31432186 C>A

31432187 C>G

31432188 C>G

31432495 C>A


JPT

1

A*11:02

A*11:01

30018566 A>G


Erlich et al. BMC Genomics 2011 12:42   doi:10.1186/1471-2164-12-42

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