Table 4

Anchor markers for RAD-only map construction.

Locus

Gene

Chromosome

Phenotype

Gene


VRS-1

HvHox1

2H

Two-row inflorescence (Vrs1Vrs1)/six-row inflorescence (vrs1vrs1)

[49] GenBank:[AB489122.1]

ZEO-1

NA

2H

Dwarf plant with compact head (Zeo1)/normal height and head length (zeo1)

ALM

NA

3H

Green lemma and nodes (Alm)/albino lemma and nodes (alm)

HSH

NA

4H

Hairs on lower leaf sheaths (Hsh)/lack of hair on lower leaf sheaths (hsh)

SRH

NA

5H

Long hairs on rachilla (Srh/short hairs on rachilla (srh)

ROB

NA

6H

Green lemma and nodes (Rob)/orange lemma and nodes (rob)

WX

GBSS-I

7H

Wild type endosperm starch (Wx)/waxy endosperm starch (wx)

[50] GenBank:[AF486518.1]

NUD

NA

7H

Hulled seed (Nud)/hulless seed (nud)

[51] GenBank:[AP009567]

LKS2

NA

7H

Long awn (Lks2)/short awn (lks2)


Nine morphological marker loci used for linkage map construction, together with RAD loci, in the Oregon Wolfe Barley mapping population, showing chromosome assignments, phenotypes, and genes (if known).

Chutimanitsakun et al. BMC Genomics 2011 12:4   doi:10.1186/1471-2164-12-4

Open Data