Table 1 |
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|
Description of small RNA libraries from different melon tissues |
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|
Library |
Cultivar/accession |
Tissue |
Physiological condition |
Virusa |
Reads |
Unique sequences |
|
|
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|
Wtm |
cv. Tendral |
Cotyledon |
Mock-inoculated |
-- |
33123 |
15624 |
|
Wt |
cv. Tendral |
Cotyledon |
Virus-infected |
WMV-M116 |
35860 |
12840 |
|
Cwm |
accession TGR-1551 |
Cotyledon |
Mock-inoculated |
-- |
41039 |
21122 |
|
Cw |
accession TGR-1551 |
Cotyledon |
Virus-infected |
WMV-M116 |
36330 |
24100 |
|
15d |
cv. Piel de Sapo |
Fruit |
Healthy, 15 days after pollination |
-- |
21662 |
14620 |
|
45d |
cv. Piel de Sapo |
Fruit |
Healthy, 45 days after pollination |
-- |
9942 |
8167 |
|
c1 |
cv. Piel de Sapo |
Ovary |
Healthy |
-- |
18764 |
15269 |
|
c5 |
cv. Piel de Sapo |
Ovary |
Healthy |
-- |
14529 |
12608 |
|
Ta5 |
cv. Tendral |
Cotyledon |
Virus-infected |
MNSV-alfa5 |
43170 |
22869 |
|
3'T |
cv. Tendral |
Cotyledon |
Virus-infected |
MNSV (chimeric) |
56425 |
56425 |
|
|
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|
aWMV = Watermelon mosaic virus; MNSV (alfa5) = Melon necrotic spot virus, alfa5 isolate; MNSV (chimeric) = Melon necrotic spot virus, alfa5 isolate with 3' UTR from 264 isolate |
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|
Gonzalez-Ibeas et al. BMC Genomics 2011 12:393 doi:10.1186/1471-2164-12-393 |
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