Table 1

Strains Interrogated in this Study

    DMB ID

    Other Designation

    Serotype

    Pathotype

    Source


EC1427

493/89

O157:H-

EHEC1

Human, Germany, 1989

EC510

4936i

O157:H-

STEC

Human

EC1231

G5101

O157:H7

EHEC1

Human, WA, 1995

EC506

ATCC43888

O157:H7

EHEC

Human

EC873

0015

O157:H7

EHEC

Human

EC1220

CAN28

O157:H7

EHEC

Human, Canada

93-111

93-111

O157:H7

EHEC1

Human, WA, 1993

95-0001A

95-0001A

O157:H7

NA

NA

EC867

0004

O157:H7

EHEC

Salami

EC4501

E2006002641

O157:H7

EHEC

Human, Taco John

EC1276

ATCC BAA-460

O157:H7

EHEC

ATCC BAA-460

EC866

0003

O157:H7

EHEC

WA

EC874

0016

O157:H7

EHEC

Apple Cider

EC877

0019

O157:H7

EHEC

Jack-in-the-box, 1993

EC868

0005

O157:H7

EHEC

NA

EC871

0012

O157:H7

EHEC

Human, AK, 1983

EC876

0018

O157:H7

EHEC

NA

EC533

86-24

O157:H7

NA

Human, WA, 1986

EC879

0023

O157:H7

EHEC

NA

EC878

0022

O157:H7

EHEC

derived from 86-24

EC883

0027

O157:H7

EHEC

NA

86-24

86-24

O157:H7

EHEC1

Human, WA, 1986

EC887

0032

O157:H7

EHEC

NA

EC881

0025

O157:H7

EHEC

mutant of 86-24

EC882

0026

O157:H7

EHEC

NA

EC535

86-01

O157:H7

EHEC

Human, WA, 1986

EC552

491

O157:H7

EHEC

Human Sizzler Steak House

EC1422

DEC3A

O157:H7

EHEC1

Human, WA, 1985

EC507

ATCC35150

O157:H7

EHEC

Human

EC1221

CAN110

O157:H7

EHEC

Human, Canada

EC1219

CAN12

O157:H7

EHEC

Human, Canada

EC1218

WETH

O157:H7

EHEC

Human, 2003

EC1222

CAN146

O157:H7

EHEC

Human, Canada

EC1217

MUS

O157:H7

EHEC

Human, 2003

EC1425

DEC3D

O157:H7

EHEC1

Human, MI, 1988

EC870

0009

O157:H7

EHEC

NA

EC516

EC269

O157:H7

EHEC

Human

EC1215

DIRKA

O157:H7

EHEC

Human, 2000

EC1226

OK-1

O157:H7

EHEC1

Human, Japan, 1996

EC512

EC262

O157:H7

EHEC

Hamburger

EC518

EC267

O157:H7

EHEC

Human

EC514

EC260

O157:H7

EHEC

PAH, CA Dept Health

EC515

EC261

O157:H7

EHEC

PAH, CA Dept Health

EC502

EC121

O157:H7

EHEC

PAH, CA Dept Health

EC1274

ATCC 43895

O157:H7

EHEC

ATCC 43895

EC1423

DEC3B

O157:H7

EHEC1

Human, WA, 1988

EC423

#260

O157:H7

NA

NA

EC503

EC177

O157:H7

EHEC

Human

EC885

0029

O157:H7

EHEC

NA

EC872

0013

O157:H7

EHEC

NA

EC504

ATCC43894

O157:H7

EHEC

Human

EC509

ATCC43890

O157:H7

EHEC

Human

EC875

0017

O157:H7

EHEC

Human

EC1214

CAI

O157:H7

EHEC

Human, 2002

EC869

0006

O157:H7

EHEC

NA

EC1212

EC536-ΔmutS

O157:H7

EHEC

EC536-ΔmutS

EC1242

48

O157:H7

EHEC

Human, GA 1992

EC536

86-17

O157:H7

EHEC

EC513

EC263

O157:H7

EHEC

Human

EC517

EC266

O157:H7

EHEC

Human

EC508

ATCC43889

O157:H7

EHEC

Human

EC4401

06E02109

O157:H7

EHEC

Human, PA, 2006

EC1429

DEC4B

O157:H7

EHEC1

Human, Denmark, 1987

EC4001

KY 06-830

O157:H7

EHEC

Human, 2006

EC4002

KY 06-831

O157:H7

NA

Human, 2006

EC886

0031

O55:H7

EPEC

Human, WA, 1991

DEC5A

DEC5A

O55:H7

EPEC

Human, NY

ECOR37

ECOR37

ON:HN

NA

Marmoset, WA

EC1364

DEC2A

O55:H6

EPEC1

Human, Congo, 1962

EC1521

CFT073

O6:H1:K2

UPEC

ATCC 700928

ECOR56

ECOR56

O6:H1

NA

Human, Sweden

ECOR55

ECOR55

O25:H1

UPEC

Human, Sweden

EC591

ATCC35376

ON:NM

NA

Gorilla, WA

EC699

V27

O2:K5:H1

ExPEC

Human, WA

ECOR51

ECOR51

O25:HN

NA

Human, MA

ECOR23

ECOR23

O86:H43

NA

Elephant, WA

ECOR52

ECOR52

O25:H1

NA

Orangutan, WA

ECOR54

ECOR54

O25:H1

NA

Human, IA

ECOR32

ECOR32

O7:H21

NA

Giraffe, WA

EC678

H38-2906

O1:K1:H7

ExPEC

Human, WA

EC669

H15-2267

O2:K1:H7

ExPEC

Human, WA

EC674

H25-2916

O2:K1:H7

ExPEC

Human, WA

EC715

PM6

O2:K1:H7

ExPEC

Human, WA

EC728

168-2P6(B)

O2:K1:H7

ExPEC

Human, WA

ECOR61

ECOR61

O2:NM

NA

Human, Sweden

ECOR62

ECOR62

O2:NM

UPEC

Human, Sweden

ECOR59

ECOR59

O4:H40

NA

Human, MA, 1979

EC665

H5-2631

O18ac:K5:H-

ExPEC

Human, WA

ECOR64

ECOR64

O75:NM

UPEC

Human, Sweden

ECOR65

ECOR65

ON:H10

NA

Celebese ape, WA

EC1381

536

O6:H31

UPEC

Human, Model UTI, PAI

ECOR53

ECOR53

O4:HN

NA

Human, IA

ECOR60

ECOR60

O4:HN

UPEC

Human, Sweden

ECOR42

ECOR42

ON:H26

NA

Human, MA, 1979

ECOR31

ECOR31

O79:H43

NA

Leopard, WA

ECOR43

ECOR43

ON:HN

NA

Human, Sweden

ECOR35

ECOR35

O1:NM

NA

Human, IA

ECOR36

ECOR36

O79:H25

NA

Human, IA

EC716

PM7

O7:H-

ExPEC

Human, WA

ECOR40

ECOR40

O7:NM

UPEC

Human, Sweden

EC590

ATCC35360

O7:NM

NA

Human, Tonga, 1982

ECOR38

ECOR38

O7:NM

NA

Human, IA

ECOR39

ECOR39

O7:NM

NA

Human, Sweden

EC689

V14

O2:K5:H-

ExPEC

Human, WA

ECOR49

ECOR49

O2:NM

NA

Human, Sweden

ECOR50

ECOR50

O2:HN

UPEC

Human, Sweden

ECOR46

ECOR46

O1:H6

NA

Ape, WA

ECOR48

ECOR48

ON:HM

UPEC

Human, Sweden

EC1522

NBFAC05.034.01

O157

NA

Thailand, 1986

ECOR44

ECOR44

ON:HN

NA

Cougar, WA

ECOR47

ECOR47

OM:H18

NA

Sheep, New Guinea

SH20011

SH20011

dysenteriae

dysenteriae

W. Reed

SH20008

ATCC 9207

boydii

boydii

W. Reed

SH20009

53G

sonnei

sonnei

W. Reed

SH20010

2457T

flexneri

flexneri

W. Reed

EC1517

E110019

O111:H9

EPEC

Human, Finland

EC1410

MT#80

O103:H2

NA

Human; MT

EC1375

DEC12F

O111:NM

EPEC2

Human, WA, 1983

EC1370

DEC8B

O111:H8

EHEC2

Human, ID, 1986

EC1400

3007-85

O111:NM

EHEC2

Human, NE, 1985

EC1449

DEC8A

O111a:NM

EHEC2

Human, MD, 1977

EC1460

DEC10B

O26:H11

EHEC2

Human, Australia, 1986

EC400

NA

O26:H11

EHEC

Human

EC1495

H19

O26:11

EHEC2

Human

EC1497

VP30

O26:H-

EHEC2

Human, Chile, 1989

EC1496

TB285C

O26:H-

EHEC2

Human, WA, 1991

EC1395

TB285A

O26:H2

EHEC2

Human, WA, 1991

EC1459

H30

O26:H11

EHEC2

Human, UK

EC1464

RDEC-1

O15:NM

EHEC2

Rabbit, SC, 1970

EC1454

DEC9A

O26:H11

EHEC2

Human, WI, 1961

EC1457

DEC9D

O26:H11

EHEC2

Human, Denmark, 1967

ECOR66

ECOR66

O4:H40

NA

Celebese ape, WA

ECOR63

ECOR63

ON:NM

NA

Human, Sweden

EC592

ATCC35386

O4:H43

NA

Goat, Indonesia

ECOR24

ECOR24

O15:NM

NA

Human, Sweden

ECOR70

ECOR70

O78:NM

NA

Gorilla, WA

ECOR72

ECOR72

O144:H8

UPEC

Human, Sweden

EC718

PM9

O9:K34:H-

ExPEC

Human, WA

ECOR71

ECOR71

O78:NM

NA

Human, Sweden

ECOR58

ECOR58

O112:H8

NA

Lion, WA

ECOR69

ECOR69

ON:NM

NA

Celebese ape, WA

ECOR68

ECOR68

ON:NM

NA

Giraffe, WA

EC319

B7A

O148:H28

ETEC

NA

ECOR7

ECOR7

O85:HN

NA

Orangutan, WA

EC1523

NBFAC05.034.02

O157

NA

Thailand, 1986

ECOR34

ECOR34

O88:NM

NA

Dog, MA

ECOR29

ECOR29

O150:H21

NA

Kangaroo rat, NV

ECOR33

ECOR33

O7:H21

NA

Sheep, CA

EC589

ATCC35349

O113:H21

NA

Bison, Canada

ECOR26

ECOR26

O104:H21

NA

Human, MA

ECOR27

ECOR27

O104:NM

NA

Giraffe, WA

ECOR28

ECOR28

O104:NM

NA

Human, IA

ECOR45

ECOR45

ON:HM

NA

Pig, Indonesia

EC1490

MG1655

OR:H48:K-

NA

ATCC 47076

MG1655-mutS

MG1655-ΔmutS

OR:H48:K-

NA

MG1655-ΔmutS

EC1216

FULLE

NA

NA

Human, 2003

ECOR6

ECOR6

ON:HM

NA

Human, IA

ECOR25

ECOR25

ON:HN

NA

Dog, NY

ECOR10

ECOR10

O6:H10

NA

Human, Sweden

ECOR8

ECOR8

O86:NM

NA

Human, IA

ECOR1

ECOR1

ON:HN

NA

Human, IA

ECOR3

ECOR3

O1:NM

NA

Dog, MA

ECOR18

ECOR18

O5:NM

NA

Celebese ape, WA

EC1223

CAN9139

NA

NA

Human, Canada

ECOR14

ECOR14

OM:HN

UPEC

Human, Sweden

ECOR9

ECOR9

ON:NM

NA

Human, Sweden

ECOR12

ECOR12

O7:H32

NA

Human, Sweden

ECOR5

ECOR5

O79:NM

NA

Human, IA

ECOR11

ECOR11

O6:H10

UPEC

Human, Sweden

ECOR2

ECOR2

ON:H32

NA

Human, NY, 1979

ECOR13

ECOR13

ON:HN

NA

Human, Sweden

ECOR20

ECOR20

O89:HN

NA

Steer, Bali

ECOR21

ECOR21

O121:HN

NA

Steer, Bali

EC563

ATCC43886

O25:K98:NM

ETEC

Human

ECOR19

ECOR19

O5:NM

NA

Celebese ape, WA

EC164

4608-58

O143

EIEC

NA

EC568

ATCC43893

O124:NM

EIEC

ATCC 43893

EC884

0028

O55:H7

EPEC

Human, WA, 1991

ECOR15

ECOR15

O25:NM

NA

Human, Sweden

ECOR16

ECOR16

ON:H10

NA

Leopard, WA

ECOR22

ECOR22

ON:HN

NA

Steer, Bali

ECOR17

ECOR17

O106:NM

NA

Pig, Indonesia

ECOR4

ECOR4

ON:HN

NA

Human, IA


When a strain history is unknown, we used a "NA" designation.

Jackson et al. BMC Genomics 2011 12:349   doi:10.1186/1471-2164-12-349

Open Data