Figure 1.

Comparing microarray probe set summarization methods: RMA vs. MAS 5.0 from two sequenced references strains of Escherichia coli O157:H7 (EDL933 and Sakai). (A.) Scatter plots showing RMA summarized probe set intensities from strains EDL933 (y-axis) and Sakai (x-axis). (B.) Scatter plots showing MAS 5.0 summarized probe set intensities from strains EDL933 (y-axis) and Sakai (x-axis). In both A. and B., data points are color-coded based on their intensities in EDL933. (C.) Line plot showing EDL933 RMA intensity relative to Sakai RMA intensity (log2[EDL933]/[Sakai]). (D.) Line plot showing EDL933 MAS 5.0 intensity relative to Sakai MAS 5.0 intensity (log2[EDL933]/[Sakai]).

Jackson et al. BMC Genomics 2011 12:349   doi:10.1186/1471-2164-12-349
Download authors' original image