Table 2

Fold-change in expression of genes in the phosphorus assimilation pathway in cultures grown in 0.1 μM PO4 vs f/2 medium.


Stationary 0.1 μM PO4/

Stationary f/2

Stationary f/2/Log f/2

Stationary 0.1 μM PO4/

Log f/2


Gene

Contig #

Top BLASTx

e-value

fold change

p-value

fold change

p-value

fold change

p-value


Mn-dependent inorganic pyrophosphatase

3803

1.00E-42

1.04

0.7064

-1.38

0.0002

-1.34

1.40E-05

Plastid inorganic pyrophosphatase

4129

1.00E-49

-1.42

4.24E-08

1.76

1.65E-23

1.25

0.0022

4809

1.00E-103

1.16

0.2

3.10

8.52E-25

3.41

6.77E-21

V type H+-translocating inorganic pyrophosphatase

2166

3.00E-34

1.05

0.6177

1.33

0.0005

1.36

1.08E-06

4595

1.00E-61

1.60

0.0001

-1.03

0.8259

1.50

0.0006

7738

9.00E-40

1.31

0.0018

1.14

0.2264

1.45

0.0005

8774

1.00E-24

-1.23

0.0366

-1.56

1.58E-06

-1.92

1.86E-07

10241

9.00E-29

1.33

0.0019

1.46

0.0001

1.92

2.60E-08

Acid phosphatase

9839

2.00E-57

1.80

7.01E-09

-1.63

0.0081

1.15

0.3335

4279

5.00E-31

1.69

6.52E-12

-1.31

2.64E-05

1.23

2.35E-05

8626

1.00E-05

-1.79

2.80E-11

1.19

0.0211

-1.49

1.76E-11

10776

1.00E-12

1.33

0.0108

1.02

0.7163

-1.28

0.0167

Purple acid phosphatase

10336

9.00E-20

-1.13

0.5343

2.22

0.0372

2.03

0.0952

Alkaline phosphatase

9702

9.00E-22

-1.1

0.3349

1.08

0.292

-1.01

0.9311

Plastid phosphate translocator

9723

1.00E-19

-1.20

0.0066

1.54

1.78E-10

1.28

4.26E-07

Glutamine synthetase, type III

214

5.00E-31

1.03

0.7576

2.39

4.14E-08

2.42

3.74E-10

2215

2.00E-14

1.16

8.66E-06

1.09

0.2455

1.75

3.87E-07

2216

5.00E-08

1.02

0.7891

-1.38

0.4855

-1.05

0.5808

type I or II

547

1.00E-19

-1.33

8.47E-05

1.29

3.85E-07

-1.09

0.1286

2193

2.00E-58

1.29

0.0407

1.20

0.2996

1.51

0.0157


Bolded values meet the significance cutoff of ±1.7 and p ≤ 10-4.

Morey et al. BMC Genomics 2011 12:346   doi:10.1186/1471-2164-12-346

Open Data