Table 3 |
||||
|
Predicted miRNA targets in A. auriculiformis and A. mangium. |
||||
|
miRNA |
Known miRNA targets |
Blastx ID |
Blastx annotation |
E-value |
|
|
||||
|
160a |
Auxin Response |
XP_002519531.1 |
Auxin Response factor |
0.0 |
|
160b |
Factors |
XP_002519531.1 |
Auxin Response factor |
5e-145 |
|
|
||||
|
170a |
AAM63621.1 |
Flavonol synthase-like protein |
7e-12 |
|
|
|
||||
|
172a |
APETALA 2 |
XP_002534399.1 |
APETALA 2 |
7e-65 |
|
XP_002527501.1 |
Signal transducer |
1e-88 |
||
|
XP_002320412.1 |
F-box protein |
2e-146 |
||
|
XP_002331783.1 |
Cc-NBS-LRR resistance protein |
5e-60 |
||
|
AAD41092.1 |
Xyloglucan fucosyltransferase |
1e-110 |
||
|
172b |
XP_002320412.1 |
F-box protein |
0.0 |
|
|
NP_973532.1 |
Protein kinase |
0.0 |
||
|
XP_002516311.1 |
ATP binding protein |
4e-158 |
||
|
NP_001119113.1 |
Zinc ion binding |
0.0 |
||
|
Q9M5Q1.1 |
Xyloglucan fucosyltransferase |
2e-104 |
||
|
|
||||
|
319a |
TCP transcription factors |
NP_187372.4 |
ATGSL10 (glucan synthase-like 10) |
0.0 |
|
AAC16330.1 |
SAR DNA-binding protein |
0.0 |
||
|
319b |
NP_187372.4 |
ATGSL10 (glucan synthase-like 10) |
0.0 |
|
|
|
||||
|
396a |
Cell proliferation, |
AAB99745.1 |
Heat shock protein 70 |
0.0 |
|
GRL |
XP_002331783.1 |
Cc-NBS-LRR resistance protein |
2e-74 |
|
|
transcription factors |
AAM61431.1 |
Developmental protein |
5e-84 |
|
|
396b |
NP_195570.1 |
Metal ion binding protein |
7e-64 |
|
|
|
||||
|
2086a |
Unknown |
AAC27411.1 |
Nodulin-like protein |
0.0 |
|
2086b |
AAC27411.1 |
Nodulin-like protein |
3e-16 |
|
|
|
||||
|
a A. auriculiformis b A. mangium |
||||
|
Wong et al. BMC Genomics 2011 12:342 doi:10.1186/1471-2164-12-342 |
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