Table 3

Predicted miRNA targets in A. auriculiformis and A. mangium.

miRNA

Known miRNA targets

Blastx ID

Blastx annotation

E-value


160a

Auxin Response

XP_002519531.1

Auxin Response factor

0.0

160b

Factors

XP_002519531.1

Auxin Response factor

5e-145


170a

AAM63621.1

Flavonol synthase-like protein

7e-12


172a

APETALA 2

XP_002534399.1

APETALA 2

7e-65

XP_002527501.1

Signal transducer

1e-88

XP_002320412.1

F-box protein

2e-146

XP_002331783.1

Cc-NBS-LRR resistance protein

5e-60

AAD41092.1

Xyloglucan fucosyltransferase

1e-110

172b

XP_002320412.1

F-box protein

0.0

NP_973532.1

Protein kinase

0.0

XP_002516311.1

ATP binding protein

4e-158

NP_001119113.1

Zinc ion binding

0.0

Q9M5Q1.1

Xyloglucan fucosyltransferase

2e-104


319a

TCP transcription factors

NP_187372.4

ATGSL10 (glucan synthase-like 10)

0.0

AAC16330.1

SAR DNA-binding protein

0.0

319b

NP_187372.4

ATGSL10 (glucan synthase-like 10)

0.0


396a

Cell proliferation,

AAB99745.1

Heat shock protein 70

0.0

GRL

XP_002331783.1

Cc-NBS-LRR resistance protein

2e-74

transcription factors

AAM61431.1

Developmental protein

5e-84

396b

NP_195570.1

Metal ion binding protein

7e-64


2086a

Unknown

AAC27411.1

Nodulin-like protein

0.0

2086b

AAC27411.1

Nodulin-like protein

3e-16


a A. auriculiformis

b A. mangium

Wong et al. BMC Genomics 2011 12:342   doi:10.1186/1471-2164-12-342

Open Data