Table 1

Summary of de novo transcriptome assembly

Species

A. auriculiformis

A. mangium

Filtered reads (paired-ends)

7,743,336

6,392,887

Filtered reads (single-ends)

15,486,672

12,785,774

Total assembled size (bp)

21,022,649

17,838,260

Number of contigs and scaffolds

42,217

35,759

Longest contig (bp)

15,262

15,220

N50 (bp)

949

938

Average length (bp)

498

496

GC content (%)

43

43

Estimated coverage

18.7 ×

18.3 ×

Wong et al. BMC Genomics 2011 12:342   doi:10.1186/1471-2164-12-342